Publications 2013

(1) Baaden, M.; Marrink, S. J. Coarse-Grain Modelling of Protein-Protein Interactions. Curr. Opin. Struct. Biol. 2013, 23 (6), 878–886 DOI: 10.1016/j.sbi.2013.09.004.

(2) Cragnolini, T.; Derreumaux, P.; Pasquali, S. Coarse-Grained Simulations of RNA and DNA Duplexes. J Phys Chem B 2013, 117 (27), 8047–8060 DOI: 10.1021/jp400786b.

(3) Figaro, S.; Durand, S.; Gilet, L.; Cayet, N.; Sachse, M.; Condon, C. Bacillus Subtilis Mutants with Knockouts of the Genes Encoding Ribonucleases RNase Y and RNase J1 Are Viable, with Major Defects in Cell Morphology, Sporulation, and Competence. J. Bacteriol. 2013, 195 (10), 2340–2348 DOI: 10.1128/JB.00164-13.

(4) Hamdane, D.; Bruch, E.; Un, S.; Field, M.; Fontecave, M. Activation of a Unique Flavin-Dependent TRNA-Methylating Agent. Biochemistry 2013, 52 (49), 8949–8956 DOI: 10.1021/bi4013879.

(5) Kalimeri, M.; Rahaman, O.; Melchionna, S.; Sterpone, F. How Conformational Flexibility Stabilizes the Hyperthermophilic Elongation Factor G-Domain. J Phys Chem B 2013, 117 (44), 13775–13785 DOI: 10.1021/jp407078z.

(6) Michelet, L.; Zaffagnini, M.; Morisse, S.; Sparla, F.; Perez-Perez, M. E.; Francia, F.; Danon, A.; Marchand, C. H.; Fermani, S.; Trost, P.; Lemaire, S. D. Redox Regulation of the Calvin-Benson Cycle: Something Old, Something New. Front. Plant Sci. 2013, 4, 470 DOI: 10.3389/fpls.2013.00470.

(7) Sterpone, F.; Nguyen, P. H.; Kalimeri, M.; Derreumaux, P. Importance of the Ion-Pair Interactions in the OPEP Coarse-Grained Force Field: Parametrization and Validation. J Chem Theory Comput 2013, 9 (10), 4574–4584 DOI: 10.1021/ct4003493.

(8) Takahashi, H.; Clowez, S.; Wollman, F.-A.; Vallon, O.; Rappaport, F. Cyclic Electron Flow Is Redox-Controlled but Independent of State Transition. Nat Commun 2013, 4, 1954 DOI: 10.1038/ncomms2954.

(9) Tourasse, N. J.; Choquet, Y.; Vallon, O. PPR Proteins of Green Algae. RNA Biol 2013, 10 (9), 1526–1542 DOI: 10.4161/rna.26127.

(10) Zaffagnini, M.; Fermani, S.; Costa, A.; Lemaire, S. D.; Trost, P. Plant Cytoplasmic GAPDH: Redox Post-Translational Modifications and Moonlighting Properties. Front. Plant Sci. 2013, 4, 450 DOI: 10.3389/fpls.2013.00450.

(11) Zaffagnini, M.; Morisse, S.; Bedhomme, M.; Marchand, C. H.; Festa, M.; Rouhier, N.; Lemaire, S. D.; Trost, P. Mechanisms of Nitrosylation and Denitrosylation of Cytoplasmic Glyceraldehyde-3-Phosphate Dehydrogenase from Arabidopsis Thaliana. J. Biol. Chem. 2013, 288 (31), 22777–22789 DOI: 10.1074/jbc.M113.475467.

(12) Zoonens, M.; Comer, J.; Masscheleyn, S.; Pebay-Peyroula, E.; Chipot, C.; Miroux, B.; Dehez, F. Dangerous Liaisons between Detergents and Membrane Proteins. The Case of Mitochondrial Uncoupling Protein 2. J. Am. Chem. Soc. 2013, 135 (40), 15174–15182 DOI: 10.1021/ja407424v.

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