Publications 2017

  1. Salinas-Giegé, T.; Cavaiuolo, M.; Cognat, V.; Ubrig, E.; Remacle, C.; Duchêne, A.-M.; Vallon, O.; Maréchal-Drouard, L. Polycytidylation of Mitochondrial MRNAs in Chlamydomonas Reinhardtii. Nucleic Acids Res. 2017, 45 (22), 12963–12973 lien
  2. Vakirlis, N. N.; Hebert, A. S.; Opulente, D. A.; Achaz, G.; Hittinger, C. T.; Fischer, G.; Coon, J. J.; Lafontaine, I. A Molecular Portrait of de Novo Genes in Yeasts. Mol. Biol. Evol. 2017 lien
  3. Puvanendran, D.; Cece, Q.; Picard, M. Reconstitution of the Activity of RND Efflux Pumps: A “Bottom-up” Approach. Res. Microbiol. 2017 lien
  4. Dumas, L.; Zito, F.; Blangy, S.; Auroy, P.; Johnson, X.; Peltier, G.; Alric, J. A Stromal Region of Cytochrome B6f Subunit IV Is Involved in the Activation of the Stt7 Kinase in Chlamydomonas. PNAS 2017, 201713343. lien
  5. Cavaiuolo, M.; Kuras, R.; Wollman, F.-A.; Choquet, Y.; Vallon, O. Small RNA Profiling in Chlamydomonas: Insights into Chloroplast RNA Metabolism. Nucleic Acids Res. 2017, 45 (18), 10783–10799. lien
  6. Jagodnik, J.; Chiaruttini, C.; Guillier, M. . Molecular Cell 2017. lien
  7. Ma, M.; Li de La Sierra Gallay, I.; Lazar, N.; Pellegrini, O.; Lepault, J.; Condon, C.; Durand, D.; van Tilbeurgh, H. Trz1, . Biochem. J. 2017 lien
  8. Jabrani, A.; Makamte, S.; Moreau, E.; Gharbi, Y.; Plessis, A.; Bruzzone, L.; Sanial, M.; Biou, V. Biophysical Characterisation of the Novel Zinc Binding Property in Suppressor of Fused. Scientific Reports 2017, 7 (1), 11139. lien
  9. Boniello, G.; Tribet, C.; Marie, E.; Croquette, V.; Zanchi, D. Rolling and Ageing in T-Ramp Soft Adhesion. arXiv:1709.02971 [cond-mat] 2017. lien
  10. De Vecchis, D.; Cavellini, L.; Baaden, M.; Hénin, J.; Cohen, M. M.; Taly, A. A Membrane-Inserted Structural Model of the Yeast Mitofusin Fzo1. Sci Rep 2017, 7 (1), 10217. lien
  11. Danilowicz, C.; Hermans, L.; Coljee, V.; Prévost, C.; Prentiss, M. ATP Hydrolysis Provides Functions That Promote Rejection of Pairings between Different Copies of Long Repeated Sequences. Nucleic Acids Res 2017, 45 (14), 8448–8462. lien
  12. Katava, M.; Stirnemann, G.; Zanatta, M.; Capaccioli, S.; Pachetti, M.; Ngai, K. L.; Sterpone, F.; Paciaroni, A. Critical Structural Fluctuations of Proteins upon Thermal Unfolding Challenge the Lindemann Criterion. Proc. Natl. Acad. Sci. U.S.A. 2017. lien
  13. Bou-Nader, C.; Cornu, D.; Guerineau, V.; Fogeron, T.; Fontecave, M.; Hamdane, D. Enzyme Activation with a Synthetic Catalytic Co-Enzyme Intermediate: Nucleotide Methylation by Flavoenzymes. Angew. Chem. Int. Ed. Engl. 2017. lien
  14. Pérez-Pérez, M. E.; Mauriès, A.; Maes, A.; Tourasse, N. J.; Hamon, M.; Lemaire, S. D.; Marchand, C. H. The Deep Thioredoxome in Chlamydomonas Reinhardtii: New Insights into Redox Regulation. Mol Plant 2017, 10 (8), 1107–1125. lien
  15. Rahaman, O.; Kalimeri, M.; Katava, M.; Paciaroni, A.; Sterpone, F. Configurational Disorder of Water Hydrogen-Bond Network at the Protein Dynamical Transition. J Phys Chem B 2017, 121 (28), 6792–6798. lien
  16. Joyet, P.; Mokhtari, A.; Riboulet-Bisson, E.; Blancato, V. S.; Espariz, M.; Magni, C.; Hartke, A.; Deutscher, J.; Sauvageot, N. Enzymes Required for Maltodextrin Catabolism in Enterococcus Faecalis Exhibit Novel Activities. Appl. Environ. Microbiol. 2017, 83 (13), e00038-17. lien
  17. Caserta, G.; Pecqueur, L.; Adamska-Venkatesh, A.; Papini, C.; Roy, S.; Artero, V.; Atta, M.; Reijerse, E.; Lubitz, W.; Fontecave, M. Structural and Functional Characterization of the Hydrogenase-Maturation HydF Protein. Nat. Chem. Biol. 2017, 13 (7), 779–784 . lien
  18. Graf, M.; Bonetti, D.; Lockhart, A.; Serhal, K.; Kellner, V.; Maicher, A.; Jolivet, P.; Teixeira, M. T.; Luke, B. Telomere Length Determines TERRA and R-Loop Regulation through the Cell Cycle. Cell 2017, 170 (1), 72–85.e14. lien
  19. Arragain, S.; Bimai, O.; Legrand, P.; Caillat, S.; Ravanat, J.-L.; Touati, N.; Binet, L.; Atta, M.; Fontecave, M.; Golinelli-Pimpaneau, B. Nonredox Thiolation in TRNA Occurring via Sulfur Activation by a [4Fe-4S] Cluster. PNAS 2017, 201700902. lien
  20. Mazur, A. K. Weak Nanoscale Chaos and Anomalous Relaxation in DNA. Phys. Rev. E 2017, 95 (6), 062417. lien
  21. Mazzanti, L.; Doutreligne, S.; Gageat, C.; Derreumaux, P.; Taly, A.; Baaden, M.; Pasquali, S. What Can Human-Guided Simulations Bring to RNA Folding? Biophys. J. 2017. lien
  22. Man, V. H.; Nguyen, P. H.; Derreumaux, P. High-Resolution Structures of the Amyloid-β 1-42 Dimers from the Comparison of Four Atomistic Force Fields. J Phys Chem B 2017, 121 (24), 5977–5987. lien
  23. Aroua, S.; Todorova, T. K.; Mougel, V.; Hommes, P.; Reissig, H.-U.; Fontecave, M. New Cobalt-Bisterpyridyl Catalysts for Hydrogen Evolution Reaction. ChemCatChem 2017, 9 (12), 2099–2105. lien
  24. Nawrocki, W.; Bailleul, B.; Cardol, P.; Rappaport, F.; Wollman, F.-A.; Joliot, P. Cyclic Electron Flow in Chlamydomonas Reinhardtii. bioRxiv 2017, 153288. lien
  25. Dautant, A.; Meyer, P.; Georgescauld, F. Hydrogen/Deuterium Exchange Mass Spectrometry Reveals Mechanistic Details of Activation of Nucleoside Diphosphate Kinases by Oligomerization. Biochemistry 2017, 56 (23), 2886–2896. lien
  26. Cavellini, L.; Meurisse, J.; Findinier, J.; Erpapazoglou, Z.; Belgareh-Touze, N.; Weissman, A. M.; Cohen, M. M. An Ubiquitin-Dependent Balance between Mitofusin Turnover and Fatty Acids Desaturation Regulates Mitochondrial Fusion. Nat. Commun. 2017, 8, 15832. lien
  27. Doig, A. J.; Del Castillo-Frias, M. P.; Berthoumieu, O.; Tarus, B.; Nasica-Labouze, J.; Sterpone, F.; Nguyen, P. H.; Hooper, N. M.; Faller, P.; Derreumaux, P. Why Is Research on Amyloid-β Failing to Give New Drugs for Alzheimer’s Disease? ACS Chem Neurosci 2017. lien
  28. Ma, M.; Li de la Sierra-Gallay, I.; Lazar, N.; Pellegrini, O.; Durand, D.; Marchfelder, A.; Condon, C.; van Tilbeurgh, H. The Crystal Structure of Trz1, the Long Form RNase Z from Yeast. Nucleic Acids Res. 2017, 45 (10), 6209–6216. lien
  29. Raj-Kumar, P.-K.; Vallon, O.; Liang, C. In Silico Analysis of the Sequence Features Responsible for Alternatively Spliced Introns in the Model Green Alga Chlamydomonas Reinhardtii. Plant Mol. Biol. 2017, 94 (3), 253–265. lien
  30. Loiseau, L.; Fyfe, C.; Aussel, L.; Hajj Chehade, M.; Hernández, S. B.; Faivre, B.; Hamdane, D.; Mellot-Draznieks, C.; Rascalou, B.; Pelosi, L.; Velours, C.; Cornu, D.; Lombard, M.; Casadesús, J.; Pierrel, F.; Fontecave, M.; Barras, F. The UbiK Protein Is an Accessory Factor Necessary for Bacterial Ubiquinone (UQ) Biosynthesis and Forms a Complex with the UQ Biogenesis Factor UbiJ. J. Biol. Chem. 2017. lien
  31. Lev, B.; Murail, S.; Poitevin, F.; Cromer, B. A.; Baaden, M.; Delarue, M.; Allen, T. W. String Method Solution of the Gating Pathways for a Pentameric Ligand-Gated Ion Channel. Proc. Natl. Acad. Sci. U.S.A. 2017, 114 (21), E4158–E4167. lien
  32. Colloc’h, N.; Sacquin-Mora, S.; Avella, G.; Dhaussy, A.-C.; Prangé, T.; Vallone, B.; Girard, E. Determinants of Neuroglobin Plasticity Highlighted by Joint Coarse-Grained Simulations and High Pressure Crystallography. Sci Rep 2017, 7 (1), 1858. lien
  33. Longatte, G.; Rappaport, F.; Wollman, F.-A.; Guille-Collignon, M.; Lemaitre, F. Electrochemical Harvesting of Photosynthetic Electrons from Unicellular Algae Population at the Preparative Scale by Using 2,6-Dichlorobenzoquinone. Electrochim. Acta 2017, 236, 327–332. lien
  34. Fu, H.-Y.; Picot, D.; Choquet, Y.; Longatte, G.; Sayegh, A.; Delacotte, J.; Guille-Collignon, M.; Lemaître, F.; Rappaport, F.; Wollman, F.-A. Redesigning the QA Binding Site of Photosystem II Allows Reduction of Exogenous Quinones. Nat Commun 2017, 8, 15274. lien
  35. Leroy, M.; Piton, J.; Gilet, L.; Pellegrini, O.; Proux, C.; Coppée, J.-Y.; Figaro, S.; Condon, C. Rae1/YacP, a New Endoribonuclease Involved in Ribosome-Dependent MRNA Decay in Bacillus Subtilis. EMBO J. 2017, 36 (9), 1167–1181. lien
  36. Sauvageot, N.; Mokhtari, A.; Joyet, P.; Budin-Verneuil, A.; Blancato, V. S.; Repizo, G. D.; Henry, C.; Pikis, A.; Thompson, J.; Magni, C.; Hartke, A.; Deutscher, J. Enterococcus Faecalis Uses a Phosphotransferase System Permease and a Host Colonization-Related ABC Transporter for Maltodextrin Uptake. J. Bacteriol. 2017, 199 (9), e00878-16. lien
  37. Durand, S.; Braun, F.; Helfer, A.-C.; Romby, P.; Condon, C. SRNA-Mediated Activation of Gene Expression by Inhibition of 5’-3’ Exonucleolytic MRNA Degradation. Elife 2017, 6. lien
  38. Laurin, Y.; Eyer, J.; Robert, C. H.; Prevost, C.; Sacquin-Mora, S. Mobility and Core-Protein Binding Patterns of Disordered C-Terminal Tails in β-Tubulin Isotypes. Biochemistry 2017, 56 (12), 1746–1756. lien
  39. Fogeron, T.; Retailleau, P.; Chamoreau, L.-M.; Fontecave, M.; Li, Y. The Unusual Ring Scission of a Quinoxaline-Pyran-Fused Dithiolene System Related to Molybdopterin. Dalton Trans. 2017, 46 (13), 4161–4164. lien
  40. Maes, A.; Gracia, C.; Innocenti, N.; Zhang, K.; Aurell, E.; Hajnsdorf, E. Landscape of RNA Polyadenylation in E. Coli. Nucleic Acids Res. 2017, 45 (5), 2746–2756. lien
  41. Roy, S.; Sharma, B.; Pécaut, J.; Simon, P.; Fontecave, M.; Tran, P. D.; Derat, E.; Artero, V. Molecular Cobalt Complexes with Pendant Amines for Selective Electrocatalytic Reduction of Carbon Dioxide to Formic Acid. J. Am. Chem. Soc. 2017, 139 (10), 3685–3696. lien
  42. Jagodnik, J.; Brosse, A.; Le Lam, T. N.; Chiaruttini, C.; Guillier, M. Mechanistic Study of Base-Pairing Small Regulatory RNAs in Bacteria. Methods 2017, 117, 67–76. lien
  43. Hamouche, L.; Laalami, S.; Daerr, A.; Song, S.; Holland, I. B.; Séror, S. J.; Hamze, K.; Putzer, H. Bacillus Subtilis Swarmer Cells Lead the Swarm, Multiply, and Generate a Trail of Quiescent Descendants. MBio 2017, 8 (1). lien
  44. Elgrishi, N.; Chambers, M. B.; Wang, X.; Fontecave, M. Molecular Polypyridine-Based Metal Complexes as Catalysts for the Reduction of CO2. Chem. Soc. Rev. 2017, 46 (3), 761–796. lien
  45. Katava, M.; Maccarini, M.; Villain, G.; Paciaroni, A.; Sztucki, M.; Ivanova, O.; Madern, D.; Sterpone, F. Thermal Activation of “allosteric-like” Large-Scale Motions in a Eukaryotic Lactate Dehydrogenase. Sci Rep 2017, 7, 41092. lien
  46. Eugene, S.; Bourgeron, T.; Xu, Z. Effects of Initial Telomere Length Distribution on Senescence Onset and Heterogeneity. J. Theor. Biol. 2017, 413, 58–65. lien
  47. Wang, F.; Qi, Y.; Malnoë, A.; Choquet, Y.; Wollman, F.-A.; de Vitry, C. The High Light Response and Redox Control of Thylakoid FtsH Protease in Chlamydomonas Reinhardtii. Mol Plant 2017, 10 (1), 99–114. lien
  48. Bujaldon, S.; Kodama, N.; Rappaport, F.; Subramanyam, R.; de Vitry, C.; Takahashi, Y.; Wollman, F.-A. Functional Accumulation of Antenna Proteins in Chlorophyll B-Less Mutants of Chlamydomonas Reinhardtii. Mol Plant 2017, 10 (1), 115–130. lien
  49. Huan, T. N.; Simon, P.; Rousse, G.; Génois, I.; Artero, V.; Fontecave, M. Porous Dendritic Copper: An Electrocatalyst for Highly Selective CO2 Reduction to Formate in Water/Ionic Liquid Electrolyte. Chem Sci 2017, 8 (1), 742–747. lien
  50. Carranza, G.; Angius, F.; Ilioaia, O.; Solgadi, A.; Miroux, B.; Arechaga, I. Cardiolipin Plays an Essential Role in the Formation of Intracellular Membranes in Escherichia Coli. Biochim. Biophys. Acta 2017, 1859 (6), 1124–1132. lien
  51. Ngoc Huan, T.; Simon, P.; Rousse, G.; Génois, I.; Artero, V.; Fontecave, M. Porous Dendritic Copper: An Electrocatalyst for Highly Selective CO 2 Reduction to Formate in Water/Ionic Liquid Electrolyte. Chemical Science 2017, 8 (1), 742–747. lien
  52. Gold, V. A. M.; Brandt, T.; Cavellini, L.; Cohen, M. M.; Ieva, R.; Laan, M. van der. Analysis of Mitochondrial Membrane Protein Complexes by Electron Cryo-Tomography. In Mitochondria; Methods in Molecular Biology; Humana Press, New York, NY, 2017; pp 315–336. lien
  53. Gold, V. A. M.; Brandt, T.; Cavellini, L.; Cohen, M. M.; Ieva, R.; van der Laan, M. Analysis of Mitochondrial Membrane Protein Complexes by Electron Cryo-Tomography. Methods Mol. Biol. 2017, 1567, 315–336 lien
  54. Belgareh-Touze, N.; Cavellini, L.; Cohen, M. M. Ubiquitination of ERMES Components by the E3 Ligase Rsp5 Is Involved in Mitophagy. Autophagy 2017, 13 (1), 114–132  lien
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